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B0432.8 Deoxyribonuclease TATDN3 [ Caenorhabditis elegans ]

Gene ID: 181990, updated on 2-Nov-2024

Summary

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Official Symbol
B0432.8
Official Full Name
Deoxyribonuclease TATDN3
Primary source
WormBase:WBGene00015189
Locus tag
CELE_B0432.8
See related
AllianceGenome:WB:WBGene00015189
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable hydrolase activity, acting on ester bonds and metal ion binding activity. Orthologous to human TATDN3 (TatD DNase domain containing 3). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See B0432.8 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (276212..278736, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Biopterin-dependent aromatic amino acid hydroxylase family profile domain-containing protein;Tyrosine 3-monooxygenase Neighboring gene Neuropeptide-Like Protein;Transposase Neighboring gene CIP2A N-terminal domain-containing protein Neighboring gene E3 ubiquitin-protein ligase trul-1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Metallo-beta-lactamase domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Deoxyribonuclease TATDN3
NP_001370338.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    276212..278736 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383775.2 → NP_001370338.1  Deoxyribonuclease TATDN3 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    P90989
    Conserved Domains (1) summary
    pfam01026
    Location:2 → 258
    TatD_DNase; TatD related DNase
Nucleotide Protein
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