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Ntsr1 neurotensin receptor 1 [ Mus musculus (house mouse) ]

Gene ID: 18216, updated on 28-Oct-2024

Summary

Official Symbol
Ntsr1provided by MGI
Official Full Name
neurotensin receptor 1provided by MGI
Primary source
MGI:MGI:97386
See related
Ensembl:ENSMUSG00000027568 AllianceGenome:MGI:97386
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
NTR1; NT-1R; NTR-1
Summary
Predicted to enable G protein-coupled neurotensin receptor activity and identical protein binding activity. Acts upstream of or within adult locomotory behavior. Predicted to be located in several cellular components, including dendrite; perikaryon; and symmetric synapse. Predicted to be active in plasma membrane. Is expressed in several structures, including central nervous system; eye; gallbladder; intestine; and male reproductive gland or organ. Human ortholog(s) of this gene implicated in schizophrenia. Orthologous to human NTSR1 (neurotensin receptor 1). [provided by Alliance of Genome Resources, Oct 2024]
Expression
Biased expression in CNS E18 (RPKM 4.6), genital fat pad adult (RPKM 1.5) and 10 other tissues See more
Orthologs
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Genomic context

See Ntsr1 in Genome Data Viewer
Location:
2 H4; 2 103.04 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (180141769..180186772)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (180499976..180544979)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene Mir1a-1 and Mir133a-2 host gene Neighboring gene microRNA 133a-2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:180171931-180172146 Neighboring gene STARR-positive B cell enhancer mm9_chr2:180178418-180178718 Neighboring gene STARR-seq mESC enhancer starr_06732 Neighboring gene solute carrier organic anion transporter family, member 4a1 Neighboring gene predicted gene, 30144 Neighboring gene STARR-positive B cell enhancer ABC_E9543 Neighboring gene STARR-positive B cell enhancer ABC_E4530 Neighboring gene MRG/MORF4L binding protein Neighboring gene opioid growth factor receptor

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled neurotensin receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled neurotensin receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables G protein-coupled neurotensin receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables neuropeptide receptor activity TAS
Traceable Author Statement
more info
PubMed 
enables protein-containing complex binding IEA
Inferred from Electronic Annotation
more info
 
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in D-aspartate import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 
involved_in D-aspartate import across plasma membrane ISO
Inferred from Sequence Orthology
more info
 
involved_in L-glutamate import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 
involved_in L-glutamate import across plasma membrane ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within adult locomotory behavior IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in detection of temperature stimulus involved in sensory perception of pain IEA
Inferred from Electronic Annotation
more info
 
involved_in detection of temperature stimulus involved in sensory perception of pain ISO
Inferred from Sequence Orthology
more info
 
involved_in inositol phosphate catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in inositol phosphate catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in learning IEA
Inferred from Electronic Annotation
more info
 
involved_in learning ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of apoptotic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of release of sequestered calcium ion into cytosol IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of release of sequestered calcium ion into cytosol ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of systemic arterial blood pressure IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of systemic arterial blood pressure ISO
Inferred from Sequence Orthology
more info
 
involved_in neuropeptide signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in neuropeptide signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of arachidonate secretion IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of arachidonate secretion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of gamma-aminobutyric acid secretion IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of gamma-aminobutyric acid secretion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of positive regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of glutamate secretion IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of glutamate secretion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of inhibitory postsynaptic potential IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of inhibitory postsynaptic potential ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of inositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of inositol phosphate biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of release of sequestered calcium ion into cytosol IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of release of sequestered calcium ion into cytosol ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of membrane depolarization IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of membrane depolarization ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of respiratory gaseous exchange IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of respiratory gaseous exchange ISO
Inferred from Sequence Orthology
more info
 
involved_in response to lipid IEA
Inferred from Electronic Annotation
more info
 
involved_in response to lipid ISO
Inferred from Sequence Orthology
more info
 
involved_in temperature homeostasis IEA
Inferred from Electronic Annotation
more info
 
involved_in temperature homeostasis ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in axon ISO
Inferred from Sequence Orthology
more info
 
located_in axon terminus ISO
Inferred from Sequence Orthology
more info
 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasmic side of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in dendrite ISO
Inferred from Sequence Orthology
more info
 
located_in dendritic shaft IEA
Inferred from Electronic Annotation
more info
 
located_in dendritic shaft ISO
Inferred from Sequence Orthology
more info
 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 
located_in dendritic spine ISO
Inferred from Sequence Orthology
more info
 
located_in membrane raft ISO
Inferred from Sequence Orthology
more info
 
located_in membrane raft ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in neuron spine ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
located_in perikaryon IEA
Inferred from Electronic Annotation
more info
 
located_in perikaryon ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in symmetric synapse IEA
Inferred from Electronic Annotation
more info
 
located_in symmetric synapse ISO
Inferred from Sequence Orthology
more info
 
located_in terminal bouton IEA
Inferred from Electronic Annotation
more info
 
located_in terminal bouton ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
neurotensin receptor type 1
Names
NT-R-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_018766.2NP_061236.1  neurotensin receptor type 1

    See identical proteins and their annotated locations for NP_061236.1

    Status: PROVISIONAL

    Source sequence(s)
    AB017027
    Consensus CDS
    CCDS17177.1
    UniProtKB/Swiss-Prot
    O88319
    UniProtKB/TrEMBL
    A2ACT4
    Related
    ENSMUSP00000029084.3, ENSMUST00000029084.9
    Conserved Domains (1) summary
    pfam00001
    Location:80369
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    180141769..180186772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)