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C05D11.5 Putative hydroxypyruvate isomerase [ Caenorhabditis elegans ]

Gene ID: 182258, updated on 2-Nov-2024

Summary

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Official Symbol
C05D11.5
Official Full Name
Putative hydroxypyruvate isomerase
Primary source
WormBase:WBGene00015483
Locus tag
CELE_C05D11.5
See related
AllianceGenome:WB:WBGene00015483
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable hydroxypyruvate isomerase activity. Predicted to be involved in glyoxylate metabolic process. Is expressed in body wall musculature; hypodermis; intestine; and reproductive system. Orthologous to human HYI (hydroxypyruvate isomerase (putative)). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C05D11.5 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003281.10 (6410020..6412014, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Protein let-756 Neighboring gene Metalloendopeptidase;Zinc metalloproteinase nas-4 Neighboring gene PNPLA domain-containing protein;Patatin-like phospholipase domain-containing protein atgl-1 Neighboring gene FHIP family protein C05D11.8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydroxypyruvate isomerase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables hydroxypyruvate isomerase activity IEA
Inferred from Electronic Annotation
more info
  
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in glyoxylate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Putative hydroxypyruvate isomerase
NP_498404.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    6410020..6412014 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066003.7 → NP_498404.1  Putative hydroxypyruvate isomerase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498404.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q11185
    Conserved Domains (2) summary
    COG3622
    Location:6 → 251
    Hyi; Hydroxypyruvate isomerase [Carbohydrate transport and metabolism]
    pfam01261
    Location:26 → 224
    AP_endonuc_2; Xylose isomerase-like TIM barrel
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q11185.1

Gene LinkOut

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