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C06E8.5 Lipid-binding serum glycoprotein C-terminal domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 182336, updated on 12-Jun-2024

Summary

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Gene symbol
C06E8.5
Gene description
Lipid-binding serum glycoprotein C-terminal domain-containing protein
Locus tag
CELE_C06E8.5
See related
AllianceGenome:WB:WBGene00015544
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable lipid binding activity. Predicted to be active in extracellular space. Orthologous to human LBP (lipopolysaccharide binding protein). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See C06E8.5 in Genome Data Viewer
Location:
chromosome: III
Exon count:
9
Sequence:
Chromosome: III; NC_003281.10 (7002300..7005450, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene non-specific serine/threonine protein kinase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Gamma-aminobutyric acid receptor subunit beta Neighboring gene ncRNA Neighboring gene Cuticle collagen 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Lipid-binding serum glycoprotein C-terminal domain-containing protein
NP_498530.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    7002300..7005450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066129.6 → NP_498530.2  Lipid-binding serum glycoprotein C-terminal domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498530.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q17738
    Conserved Domains (2) summary
    smart00329
    Location:356 → 560
    BPI2; BPI/LBP/CETP C-terminal domain
    smart00328
    Location:44 → 264
    BPI1; BPI/LBP/CETP N-terminal domain
Nucleotide Protein
Heading Accession and Version

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