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C07E3.8 DUF223 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 182373, updated on 2-Nov-2024

Summary

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Official Symbol
C07E3.8
Official Full Name
DUF223 domain-containing protein
Primary source
WormBase:WBGene00007418
Locus tag
CELE_C07E3.8
See related
AllianceGenome:WB:WBGene00007418
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable alpha-(1->3)-fucosyltransferase activity. Predicted to be involved in fucosylation. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C07E3.8 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (10352263..10353253)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Septin and tuftelin-interacting protein 1 homolog;Tuftelin interacting protein N-terminal domain-containing protein Neighboring gene Phospholipase A2 Neighboring gene Ovule protein;SH2 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in fucosylation IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
DUF223 domain-containing protein
NP_496229.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    10352263..10353253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063828.4 → NP_496229.2  DUF223 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496229.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q17791
    Conserved Domains (1) summary
    pfam06542
    Location:3 → 195
    PHA-1; Regulator protein PHA-1
Nucleotide Protein
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