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C10E2.2 F-box domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 182497, updated on 2-Nov-2024

Summary

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Official Symbol
C10E2.2
Official Full Name
F-box domain-containing protein
Primary source
WormBase:WBGene00015673
Locus tag
CELE_C10E2.2
See related
AllianceGenome:WB:WBGene00015673
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable ubiquitin protein ligase activity and zinc ion binding activity. Orthologous to several human genes including FBXO40 (F-box protein 40). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C10E2.2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
9
Sequence:
Chromosome: X; NC_003284.9 (16745753..16748208)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Histone deacetylase 4 Neighboring gene ncRNA Neighboring gene Inner membrane protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
F-box domain-containing protein
NP_510701.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    16745753..16748208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_078300.8 → NP_510701.2  F-box domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510701.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17324
    Conserved Domains (2) summary
    pfam15965
    Location:8 → 90
    zf-TRAF_2; TRAF-like zinc-finger
    cl02535
    Location:358 → 455
    F-box; F-box domain
Nucleotide Protein
Heading Accession and Version

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