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srd-71 Serpentine Receptor, class D (Delta);Serpentine Receptor, class D (delta);Serpentine Receptor, class T [ Caenorhabditis elegans ]

Gene ID: 182562, updated on 2-Nov-2024

Summary

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Official Symbol
srd-71
Official Full Name
Serpentine Receptor, class D (Delta);Serpentine Receptor, class D (delta);Serpentine Receptor, class T
Primary source
WormBase:WBGene00005148
Locus tag
CELE_C13B7.4
See related
AllianceGenome:WB:WBGene00005148
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srd-71 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (2423287..2426206, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class D (Delta) Neighboring gene Uncharacterized protein Neighboring gene Seven TM Receptor Neighboring gene Seven TM Receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Ohnishi K, et al. Nat Commun, 2024 Feb 23. PMID 38396085, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class D (Delta);Serpentine Receptor, class D (delta);Serpentine Receptor, class T
NP_001303714.1
  • Predicted
NP_001303715.1
  • Product from WormBase gene class srd;
    Predicted
NP_503665.2
  • Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    2423287..2426206 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071264.2 → NP_503665.2  Serpentine Receptor, class D (Delta) [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503665.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EG08
    Conserved Domains (1) summary
    pfam10317
    Location:7 → 296
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

  2. NM_001316786.1 → NP_001303715.1  Serpentine Receptor, class D (delta) [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0M7REN4

  3. NM_001316785.1 → NP_001303714.1  Serpentine Receptor, class T [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0M7REE8
    Conserved Domains (1) summary
    cl22924
    Location:7 → 206
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

RNA

  1. NR_133597.1 RNA Sequence

    Status: REVIEWED

  2. NR_133596.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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