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CTHT_0039770 synthetase-like protein [ Chaetomium thermophilum var. thermophilum DSM 1495 ]

Gene ID: 18258015, updated on 21-Dec-2023

Summary

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Gene symbol
CTHT_0039770
Gene description
synthetase-like protein
Locus tag
CTHT_0039770
Gene type
protein coding
RNA name
synthetase-like protein
RefSeq status
PROVISIONAL
Organism
Chaetomium thermophilum var. thermophilum DSM 1495 (strain: DSM 1495, variety: thermophilum, culture-collection: DSM:1495, type-material: type material of Chaetomium thermophilum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium
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Genomic context

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See CTHT_0039770 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_006383032.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene mating factor A secretion protein STE6-like protein Neighboring gene hypothetical protein Neighboring gene short-chain dehydrogenase/reductase-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006383032.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Amlacher S, et al. Cell, 2011 Jul 22. PMID 21784248

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopantetheine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid activation for nonribosomal peptide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in secondary metabolite biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synthetase-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006383032.1 Reference assembly

    Range
    6888926..6895336 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006694324.1 → XP_006694387.1  synthetase-like protein [Chaetomium thermophilum var. thermophilum DSM 1495]

    See identical proteins and their annotated locations for XP_006694387.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G0S4D3
    Conserved Domains (5) summary
    cd05918
    Location:184 → 695
    A_NRPS_SidN3_like; The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS)
    TIGR01733
    Location:202 → 613
    AA-adenyl-dom; amino acid adenylation domain
    pfam00550
    Location:729 → 794
    PP-binding; Phosphopantetheine attachment site
    cl17068
    Location:1298 → 1486
    AFD_class_I; Adenylate forming domain, Class I superfamily
    cl23853
    Location:1665 → 1909
    Condensation; Condensation domain
Nucleotide Protein
Heading Accession and Version

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