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C30F12.5 AbLIM_anchor domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 183055, updated on 2-Nov-2024

Summary

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Official Symbol
C30F12.5
Official Full Name
AbLIM_anchor domain-containing protein
Primary source
WormBase:WBGene00016264
Locus tag
CELE_C30F12.5
See related
AllianceGenome:WB:WBGene00016264
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C30F12.5 in Genome Data Viewer
Location:
chromosome: I
Exon count:
11
Sequence:
Chromosome: I; NC_003279.8 (6992072..6999706, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Isocitrate dehydrogenase [NAD] subunit, mitochondrial Neighboring gene ncRNA Neighboring gene Thyrotropin-releasing hormone receptor Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Protein ctg-1 Neighboring gene DNA helicase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
AbLIM_anchor domain-containing protein
NP_001250369.1
  • Confirmed by transcript evidence
NP_001250370.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    6992072..6999706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001263440.3 → NP_001250369.1  AbLIM_anchor domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001250369.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZ48

  2. NM_001263441.3 → NP_001250370.1  AbLIM_anchor domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001250370.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D0G904
Nucleotide Protein
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