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C36B1.9 RING-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 183252, updated on 2-Nov-2024

Summary

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Official Symbol
C36B1.9
Official Full Name
RING-type domain-containing protein
Primary source
WormBase:WBGene00007976
Locus tag
CELE_C36B1.9
See related
AllianceGenome:WB:WBGene00007976
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C36B1.9 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003279.8 (8743849..8746985, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Putative dihydrofolate reductase Neighboring gene Germline survival defective-1 Neighboring gene Protein kinase domain-containing protein Neighboring gene IntraMembrane Protease (IMPAS) family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article
  2. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables ubiquitin protein ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in protein ubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
RING-type domain-containing protein
NP_492366.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    8743849..8746985 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059965.2 → NP_492366.1  RING-type domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492366.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q93343
    Conserved Domains (3) summary
    COG5432
    Location:58 → 259
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
    cd00162
    Location:63 → 112
    RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
    cl17238
    Location:62 → 113
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
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