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fbxa-170 F-box domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 183273, updated on 18-Sep-2024

Summary

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Official Symbol
fbxa-170
Official Full Name
F-box domain-containing protein
Primary source
WormBase:WBGene00016486
Locus tag
CELE_C36C9.3
See related
AllianceGenome:WB:WBGene00016486
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See fbxa-170 in Genome Data Viewer
Location:
chromosome: X
Exon count:
4
Sequence:
Chromosome: X; NC_003284.9 (1676205..1678121, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Putative T-box protein 31 Neighboring gene ncRNA Neighboring gene J domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

General protein information

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Preferred Names
F-box domain-containing protein
NP_508309.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    1676205..1678121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075908.4 → NP_508309.1  F-box domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508309.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TZK9
    Conserved Domains (3) summary
    pfam00646
    Location:76 → 118
    F-box; F-box domain
    pfam01827
    Location:214 → 360
    FTH; FTH domain
    pfam17906
    Location:12 → 56
    HTH_48; HTH domain in Mos1 transposase
Nucleotide Protein
Heading Accession and Version

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