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sre-13 Serpentine receptor class epsilon-13 [ Caenorhabditis elegans ]

Gene ID: 183306, updated on 2-Nov-2024

Summary

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Official Symbol
sre-13
Official Full Name
Serpentine receptor class epsilon-13
Primary source
WormBase:WBGene00007997
Locus tag
CELE_C38C6.4
See related
AllianceGenome:WB:WBGene00007997
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See sre-13 in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_003280.10 (14634567..14636837, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ShKT domain-containing protein Neighboring gene pseudo Neighboring gene Uncharacterized protein Neighboring gene tRNA-Leu Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Aamy domain-containing protein;Glycosyl hydrolase family 13 catalytic domain-containing protein Neighboring gene ncRNA Neighboring gene Basement membrane proteoglycan;Basement membrane-specific heparan sulfate proteoglycan core protein;Ig-like domain-containing protein Neighboring gene Protein-cysteine N-palmitoyltransferase HHAT

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine receptor class epsilon-13
NP_497042.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    14634567..14636837 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064641.4 → NP_497042.2  Serpentine receptor class epsilon-13 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497042.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O45300
    Conserved Domains (1) summary
    pfam03125
    Location:107 → 358
    Sre; C. elegans Sre G protein-coupled chemoreceptor
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O45300.2

Gene LinkOut

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