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C39F7.1 HET domain-containing protein;Transmembrane protein [ Caenorhabditis elegans ]

Gene ID: 183348, updated on 2-Nov-2024

Summary

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Official Symbol
C39F7.1
Official Full Name
HET domain-containing protein;Transmembrane protein
Primary source
WormBase:WBGene00016538
Locus tag
CELE_C39F7.1
See related
AllianceGenome:WB:WBGene00016538
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in nervous system and reproductive system. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C39F7.1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
3
Sequence:
Chromosome: V; NC_003283.11 (1260342..1262618)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase TRIM9 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RAB family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
HET domain-containing protein;Transmembrane protein
NP_001300058.1
  • Confirmed by transcript evidence
NP_001300059.1
  • Confirmed by transcript evidence
NP_001300060.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    1260342..1262618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001313130.4 → NP_001300059.1  Transmembrane protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AXN1

  2. NM_001313129.3 → NP_001300058.1  Transmembrane protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AVD6

  3. NM_001313131.3 → NP_001300060.1  HET domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ASC1
Nucleotide Protein
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