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ceh-84 Homeobox domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 183364, updated on 18-Sep-2024

Summary

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Official Symbol
ceh-84
Official Full Name
Homeobox domain-containing protein
Primary source
WormBase:WBGene00016557
Locus tag
CELE_C40D2.4
See related
AllianceGenome:WB:WBGene00016557
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA binding activity. Predicted to be located in nucleus. Is expressed in intestine. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See ceh-84 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (1999743..2000820, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene MATH domain-containing protein Neighboring gene MATH domain-containing protein Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Homeobox domain-containing protein
NP_494148.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    1999743..2000820 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_061747.4 → NP_494148.1  Homeobox domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_494148.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O76560
    Conserved Domains (2) summary
    smart00389
    Location:66 → 109
    HOX; Homeodomain
    cd00086
    Location:17 → 53
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
Nucleotide Protein
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