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str-52 7TM_GPCR_Srx domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 183493, updated on 2-Nov-2024

Summary

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Official Symbol
str-52
Official Full Name
7TM_GPCR_Srx domain-containing protein
Primary source
WormBase:WBGene00006117
Locus tag
CELE_C45H4.12
See related
AllianceGenome:WB:WBGene00006117
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in chemosensory neurons; head; pharynx; tail hypodermis; and tail neurons. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See str-52 in Genome Data Viewer
Location:
chromosome: V
Exon count:
2
Sequence:
Chromosome: V; NC_003283.11 (2145485..2146144, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Gamma-glutamylcyclotransferase;glutathione-specific gamma-glutamylcyclotransferase Neighboring gene Seven TM Receptor Neighboring gene Serpentine Receptor, class BC (Class B-like) Neighboring gene FIP (Fungus-Induced Protein) Related Neighboring gene tRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Ohnishi K, et al. Nat Commun, 2024 Feb 23. PMID 38396085, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
7TM_GPCR_Srx domain-containing protein
NP_503579.2
  • Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    2145485..2146144 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071178.2 → NP_503579.2  7TM_GPCR_Srx domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    O44691
    Conserved Domains (1) summary
    cl22924
    Location:10 → 182
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
Nucleotide Protein
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