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inpp-5K Inositol polyphosphate 5-phosphatase [ Caenorhabditis elegans ]

Gene ID: 183643, updated on 2-Nov-2024

Summary

Official Symbol
inpp-5K
Official Full Name
Inositol polyphosphate 5-phosphatase
Primary source
WormBase:WBGene00086546
Locus tag
CELE_C50C3.7
See related
AllianceGenome:WB:WBGene00086546
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables phosphatidylinositol phosphate phosphatase activity. Acts upstream of or within with a positive effect on flagellated sperm motility. Located in several cellular components, including dendrite; neuronal cell body; and non-motile cilium. Is expressed in PVDL and PVDR. Human ortholog(s) of this gene implicated in congenital muscular dystrophy with cataracts and intellectual disability. Orthologous to human INPP5J (inositol polyphosphate-5-phosphatase J) and INPP5K (inositol polyphosphate-5-phosphatase K). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See inpp-5K in Genome Data Viewer
Location:
chromosome: III
Exon count:
6
Sequence:
Chromosome: III; NC_003281.10 (8159156..8161338, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene MSP domain-containing protein;Major sperm protein Neighboring gene Uncharacterized protein Neighboring gene Autophagy-related protein 13 homolog Neighboring gene BTB and MATH domain-containing protein 42 Neighboring gene Pre-mRNA-splicing factor 8 homolog Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables phosphatidylinositol phosphate phosphatase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in axon IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in dendrite IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in neuron projection IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
located_in non-motile cilium IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Inositol polyphosphate 5-phosphatase
NP_498783.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    8159156..8161338 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066382.6NP_498783.1  Inositol polyphosphate 5-phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498783.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34370
    Conserved Domains (1) summary
    smart00128
    Location:1284
    IPPc; Inositol polyphosphate phosphatase, catalytic domain homologues