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sre-54 Serpentine Receptor, class E (Epsilon) [ Caenorhabditis elegans ]

Gene ID: 183667, updated on 2-Nov-2024

Summary

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Official Symbol
sre-54
Official Full Name
Serpentine Receptor, class E (Epsilon)
Primary source
WormBase:WBGene00016829
Locus tag
CELE_C50E10.6
See related
AllianceGenome:WB:WBGene00016829
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See sre-54 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (12332924..12335080)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class E (Epsilon) Neighboring gene ncRNA Neighboring gene Serpentine Receptor, class E (Epsilon) Neighboring gene Serpentine Receptor, class E (epsilon) Neighboring gene Polycomb protein sop-2;SAM domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class E (Epsilon)
NP_496619.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    12332924..12335080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064218.3 → NP_496619.2  Serpentine Receptor, class E (Epsilon) [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496619.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A3QMA4
    Conserved Domains (1) summary
    pfam03125
    Location:1 → 365
    Sre; C. elegans Sre G protein-coupled chemoreceptor
Nucleotide Protein
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