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C52A11.3 PDZ domain-containing protein C52A11.3 [ Caenorhabditis elegans ]

Gene ID: 183712, updated on 18-Sep-2024

Summary

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Official Symbol
C52A11.3
Official Full Name
PDZ domain-containing protein C52A11.3
Primary source
WormBase:WBGene00008257
Locus tag
CELE_C52A11.3
See related
AllianceGenome:WB:WBGene00008257
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See C52A11.3 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (10737359..10738628)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Protein fantom Neighboring gene C2H2-type domain-containing protein Neighboring gene GLOBIN domain-containing protein Neighboring gene PDZ domain-containing protein Neighboring gene ncRNA Neighboring gene Protein ECT2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
PDZ domain-containing protein C52A11.3
NP_496315.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    10737359..10738628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063914.4 → NP_496315.2  PDZ domain-containing protein C52A11.3 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496315.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q09284
    Conserved Domains (1) summary
    cd00992
    Location:51 → 124
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q09284.2

Gene LinkOut

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