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C54E4.5 Inositol oxygenase [ Caenorhabditis elegans ]

Gene ID: 183790, updated on 2-Nov-2024

Summary

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Official Symbol
C54E4.5
Official Full Name
Inositol oxygenase
Primary source
WormBase:WBGene00016920
Locus tag
CELE_C54E4.5
See related
AllianceGenome:WB:WBGene00016920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable inositol oxygenase activity. Predicted to be involved in inositol catabolic process. Predicted to be located in cytoplasm. Orthologous to human MIOX (myo-inositol oxygenase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C54E4.5 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
5
Sequence:
Chromosome: IV; NC_003282.8 (2146672..2149297, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class BC (Class B-like) Neighboring gene Thyroglobulin type-1 domain-containing protein Neighboring gene Secreted protein Neighboring gene Soluble guanylate cyclase gcy-37 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables inositol oxygenase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables inositol oxygenase activity IEA
Inferred from Electronic Annotation
more info
  
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in inositol catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in inositol catabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Inositol oxygenase
NP_500170.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    2146672..2149297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067769.4 → NP_500170.3  Inositol oxygenase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500170.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q65CM5
    Conserved Domains (1) summary
    pfam05153
    Location:28 → 276
    MIOX; Myo-inositol oxygenase
Nucleotide Protein
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