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C55A6.3 DeHydrogenases, Short chain [ Caenorhabditis elegans ]

Gene ID: 183832, updated on 2-Nov-2024

Summary

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Official Symbol
C55A6.3
Official Full Name
DeHydrogenases, Short chain
Primary source
WormBase:WBGene00008332
Locus tag
CELE_C55A6.3
See related
AllianceGenome:WB:WBGene00008332
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable oxidoreductase activity. Predicted to be active in cytoplasm. Orthologous to human CBR3 (carbonyl reductase 3). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C55A6.3 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (11512313..11513429, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase Neighboring gene Macro domain-containing protein;NARG2_C domain-containing protein Neighboring gene ncRNA Neighboring gene Tubulin polyglutamylase ttll-5 Neighboring gene DeHydrogenases, Short chain Neighboring gene C-factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables oxidoreductase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
DeHydrogenases, Short chain
NP_505919.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    11512313..11513429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073518.7 → NP_505919.3  DeHydrogenases, Short chain [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_505919.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    P90778
    Conserved Domains (2) summary
    cd05325
    Location:6 → 241
    carb_red_sniffer_like_SDR_c; carbonyl reductase sniffer-like, classical (c) SDRs
    pfam00106
    Location:6 → 212
    adh_short; short chain dehydrogenase
Nucleotide Protein
Heading Accession and Version

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