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F13A7.11 Ubiquitinyl hydrolase 1 [ Caenorhabditis elegans ]

Gene ID: 184406, updated on 2-Nov-2024

Summary

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Official Symbol
F13A7.11
Official Full Name
Ubiquitinyl hydrolase 1
Primary source
WormBase:WBGene00008726
Locus tag
CELE_F13A7.11
See related
AllianceGenome:WB:WBGene00008726
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable hydrolase activity. Involved in innate immune response. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F13A7.11 in Genome Data Viewer
Location:
chromosome: V
Exon count:
3
Sequence:
Chromosome: V; NC_003283.11 (16394015..16395075, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Glutathione S-transferase omega Neighboring gene ncRNA Neighboring gene Serpentine receptor class delta-63 Neighboring gene Methyltransferase FkbM domain-containing protein Neighboring gene Serpentine Receptor, class E (Epsilon)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A conserved role for a GATA transcription factor in regulating epithelial innate immune responses. Shapira M, et al. Proc Natl Acad Sci U S A, 2006 Sep 19. PMID 16968778, Free PMC Article
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in innate immune response HEP PubMed 

General protein information

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Preferred Names
Ubiquitinyl hydrolase 1
NP_507144.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    16394015..16395075 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_074743.6 → NP_507144.2  Ubiquitinyl hydrolase 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_507144.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O45351
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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