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srd-40 Serpentine receptor class delta-40 [ Caenorhabditis elegans ]

Gene ID: 184608, updated on 2-Nov-2024

Summary

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Official Symbol
srd-40
Official Full Name
Serpentine receptor class delta-40
Primary source
WormBase:WBGene00005118
Locus tag
CELE_F17A2.12
See related
AllianceGenome:WB:WBGene00005118
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srd-40 in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Sequence:
Chromosome: X; NC_003284.9 (12323739..12325668)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene MX region of TRA-2 Related Neighboring gene Homeobox protein ceh-40 Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Serpentine receptor class delta-41 Neighboring gene Serpentine receptor class delta-45

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Ohnishi K, et al. Nat Commun, 2024 Feb 23. PMID 38396085, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine receptor class delta-40
NP_510062.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    12323739..12325668
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077661.2 → NP_510062.1  Serpentine receptor class delta-40 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510062.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q19509
    Conserved Domains (1) summary
    pfam10317
    Location:10 → 302
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q19509.1

Gene LinkOut

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