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pid-1 Protein pid-1 [ Caenorhabditis elegans ]

Gene ID: 184627, updated on 2-Nov-2024

Summary

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Official Symbol
pid-1
Official Full Name
Protein pid-1
Primary source
WormBase:WBGene00017549
Locus tag
CELE_F18A1.8
See related
AllianceGenome:WB:WBGene00017549
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in regulatory ncRNA-mediated gene silencing. Located in nucleus and perinuclear region of cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See pid-1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (7689681..7690556, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene BED-type domain-containing protein;LIn-26 Related Neighboring gene ncRNA Neighboring gene Transcription factor lin-26 Neighboring gene Receptor L-domain domain-containing protein Neighboring gene Na(+)/H(+) exchanger protein 2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PID-1 is a novel factor that operates during 21U-RNA biogenesis in Caenorhabditis elegans. de Albuquerque BF, et al. Genes Dev, 2014 Apr 1. PMID 24696453, Free PMC Article
  2. Molecular basis for PICS-mediated piRNA biogenesis and cell division. Wang X, et al. Nat Commun, 2021 Sep 22. PMID 34552083, Free PMC Article
  3. Structural basis of PETISCO complex assembly during piRNA biogenesis in C. elegans. Perez-Borrajero C, et al. Genes Dev, 2021 Sep 1. PMID 34413138, Free PMC Article
  4. Functional Proteomics Identifies a PICS Complex Required for piRNA Maturation and Chromosome Segregation. Zeng C, et al. Cell Rep, 2019 Jun 18. PMID 31216475
  5. PETISCO is a novel protein complex required for 21U RNA biogenesis and embryonic viability. Cordeiro Rodrigues RJ, et al. Genes Dev, 2019 Jul 1. PMID 31147388, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulatory ncRNA-mediated gene silencing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in perinuclear region of cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Protein pid-1
NP_495613.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    7689681..7690556 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063212.9 → NP_495613.1  Protein pid-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495613.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q19541
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q19541.1

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