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arrd-28 Arrestin C-terminal-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 184759, updated on 2-Nov-2024

Summary

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Official Symbol
arrd-28
Official Full Name
Arrestin C-terminal-like domain-containing protein
Primary source
WormBase:WBGene00009000
Locus tag
CELE_F21A10.4
See related
AllianceGenome:WB:WBGene00009000
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in protein transport. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See arrd-28 in Genome Data Viewer
Location:
chromosome: X
Exon count:
6
Sequence:
Chromosome: X; NC_003284.9 (10183995..10186254)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene SCP domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene EF-hand domain-containing protein Neighboring gene Myelin regulatory factor homolog 2, N-terminal Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene NUCleoBindin homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in protein transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Arrestin C-terminal-like domain-containing protein
NP_509710.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    10183995..10186254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077309.7 → NP_509710.2  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_509710.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XXN6
    Conserved Domains (1) summary
    smart01017
    Location:153 → 278
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
Nucleotide Protein
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