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F22D6.9 Serine/threonine-protein phosphatase [ Caenorhabditis elegans ]

Gene ID: 184829, updated on 2-Nov-2024

Summary

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Official Symbol
F22D6.9
Official Full Name
Serine/threonine-protein phosphatase
Primary source
WormBase:WBGene00009054
Locus tag
CELE_F22D6.9
See related
AllianceGenome:WB:WBGene00009054
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable protein serine/threonine phosphatase activity. Predicted to be active in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F22D6.9 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003279.8 (7100003..7101775)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Tudor domain-containing protein Neighboring gene pseudo Neighboring gene 40S ribosomal protein S25 Neighboring gene Secreted protein Neighboring gene pseudo Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables myosin phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Serine/threonine-protein phosphatase
NP_492012.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    7100003..7101775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059611.6 → NP_492012.1  Serine/threonine-protein phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492012.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q27494
    Conserved Domains (2) summary
    smart00156
    Location:45 → 351
    PP2Ac; Protein phosphatase 2A homologues, catalytic domain
    cl13995
    Location:25 → 350
    MPP_superfamily; metallophosphatase superfamily, metallophosphatase domain
Nucleotide Protein
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