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F22F7.2 Saccharopine dehydrogenase NADP binding domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 184861, updated on 2-Nov-2024

Summary

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Official Symbol
F22F7.2
Official Full Name
Saccharopine dehydrogenase NADP binding domain-containing protein
Primary source
WormBase:WBGene00017720
Locus tag
CELE_F22F7.2
See related
AllianceGenome:WB:WBGene00017720
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in glycolipid biosynthetic process. Predicted to be active in lipid droplet. Is expressed in intestine. Orthologous to human SCCPDH (saccharopine dehydrogenase (putative)). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F22F7.2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (2122782..2127165)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Lipid droplet localized protein Neighboring gene Gamma-glutamylcyclotransferase;glutathione-specific gamma-glutamylcyclotransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in lipid droplet IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Saccharopine dehydrogenase NADP binding domain-containing protein
NP_503576.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    2122782..2127165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071175.6 → NP_503576.2  Saccharopine dehydrogenase NADP binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503576.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9GZF0
    Conserved Domains (1) summary
    COG3268
    Location:1 → 417
    COG3268; Uncharacterized conserved protein, related to short-chain dehydrogenases [Function unknown]
Nucleotide Protein
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