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bgnt-1.2 B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog [ Caenorhabditis elegans ]

Gene ID: 184865, updated on 2-Nov-2024

Summary

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Official Symbol
bgnt-1.2
Official Full Name
B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog
Primary source
WormBase:WBGene00017723
Locus tag
CELE_F22F7.6
See related
AllianceGenome:WB:WBGene00017723
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Human ortholog(s) of this gene implicated in congenital muscular dystrophy-dystroglycanopathy type A13. Orthologous to human B4GAT1 (beta-1,4-glucuronyltransferase 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See bgnt-1.2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
9
Sequence:
Chromosome: V; NC_003283.11 (2115486..2118674, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Choline/ethanolamine kinase Neighboring gene Glycosyltransferase family 92 protein Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Increasing Complexity of the N-Glycome During Caenorhabditis Development. Wilson IBH, et al. Mol Cell Proteomics, 2023 Mar. PMID 36717059, Free PMC Article
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  4. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog
NP_001300086.1
  • Product from WormBase gene class bgnt;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    2115486..2118674 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001313157.4 → NP_001300086.1  B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AUU0
    Conserved Domains (1) summary
    pfam13896
    Location:80 → 393
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
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