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sdz-15 Skn-1 dependent zygotic transcript 15 protein [ Caenorhabditis elegans ]

Gene ID: 184905, updated on 2-Nov-2024

Summary

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Official Symbol
sdz-15
Official Full Name
Skn-1 dependent zygotic transcript 15 protein
Primary source
WormBase:WBGene00017752
Locus tag
CELE_F23F12.4
See related
AllianceGenome:WB:WBGene00017752
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in embryo development. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See sdz-15 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Sequence:
Chromosome: III; NC_003281.10 (6498476..6500110)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of lineage-specific zygotic transcripts in early Caenorhabditis elegans embryos. Robertson SM, et al. Dev Biol, 2004 Dec 15. PMID 15581881
  2. Evidence of glutathione transferase complexing and signaling in the model nematode Caenorhabditis elegans using a pull-down proteomic assay. Greetham D, et al. Proteomics, 2004 Jul. PMID 15221760
  3. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in embryo development ending in birth or egg hatching IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Skn-1 dependent zygotic transcript 15 protein
NP_498432.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    6498476..6500110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066031.3 → NP_498432.1  Skn-1 dependent zygotic transcript 15 protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498432.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P46500
    Conserved Domains (1) summary
    pfam07735
    Location:237 → 274
    FBA_2; F-box associated
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P46500.1

Gene LinkOut

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