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F38B2.3 CUB domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 185450, updated on 2-Nov-2024

Summary

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Official Symbol
F38B2.3
Official Full Name
CUB domain-containing protein
Primary source
WormBase:WBGene00009530
Locus tag
CELE_F38B2.3
See related
AllianceGenome:WB:WBGene00009530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F38B2.3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
16
Sequence:
Chromosome: X; NC_003284.9 (11281716..11286346, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Neuropeptide-Like Protein Neighboring gene Adenylate kinase isoenzyme 1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
CUB domain-containing protein
NP_001360744.1
  • Partially confirmed by transcript evidence
NP_001360745.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    11281716..11286346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001373504.1 → NP_001360744.1  CUB domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A4V0IKV9
    Conserved Domains (1) summary
    smart00042
    Location:570 → 664
    CUB; Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein

  2. NM_001373505.1 → NP_001360745.1  CUB domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A4V0INN0
    Conserved Domains (1) summary
    smart00042
    Location:573 → 667
    CUB; Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein
Nucleotide Protein
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