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srdf-2.2 3-oxo-5-alpha-steroid 4-dehydrogenase [ Caenorhabditis elegans ]

Gene ID: 185670, updated on 2-Nov-2024

Summary

Official Symbol
srdf-2.2
Official Full Name
3-oxo-5-alpha-steroid 4-dehydrogenase
Primary source
WormBase:WBGene00009635
Locus tag
CELE_F42F12.3
See related
AllianceGenome:WB:WBGene00009635
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable 3-oxo-5-alpha-steroid 4-dehydrogenase activity. Involved in innate immune response. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in hypospadias; prostate cancer; and prostatic hypertrophy. Orthologous to several human genes including SRD5A2 (steroid 5 alpha-reductase 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See srdf-2.2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
4
Sequence:
Chromosome: X; NC_003284.9 (12350578..12351788)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene tRNA-Leu Neighboring gene Cysteine-rich transmembrane CYSTM domain-containing protein Neighboring gene Acireductone dioxygenase Neighboring gene pseudo

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables 3-oxo-5-alpha-steroid 4-dehydrogenase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables 3-oxo-5-alpha-steroid 4-dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 
enables 3-oxo-5alpha-steroid 4-dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity, acting on the CH-CH group of donors IEA
Inferred from Electronic Annotation
more info
 
enables steroid dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in androgen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in innate immune response HEP PubMed 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in sex differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in steroid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in steroid metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
3-oxo-5-alpha-steroid 4-dehydrogenase
NP_510071.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    12350578..12351788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077670.2NP_510071.1  3-oxo-5-alpha-steroid 4-dehydrogenase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510071.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20344
    Conserved Domains (1) summary
    pfam02544
    Location:97243
    Steroid_dh; 3-oxo-5-alpha-steroid 4-dehydrogenase