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F49D11.3 Carbohydrate sulfotransferase [ Caenorhabditis elegans ]

Gene ID: 186032, updated on 2-Nov-2024

Summary

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Official Symbol
F49D11.3
Official Full Name
Carbohydrate sulfotransferase
Primary source
WormBase:WBGene00018627
Locus tag
CELE_F49D11.3
See related
AllianceGenome:WB:WBGene00018627
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable chondroitin 4-sulfotransferase activity. Predicted to be involved in chondroitin sulfate biosynthetic process and positive regulation of response to oxidative stress. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F49D11.3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
7
Sequence:
Chromosome: I; NC_003279.8 (10917050..10919139)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor Neighboring gene Carbohydrate sulfotransferase Neighboring gene FBA_2 domain-containing protein Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene F-box associated domain-containing protein Neighboring gene Cysteine-rich transmembrane CYSTM domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables chondroitin 4-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in positive regulation of response to oxidative stress IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Carbohydrate sulfotransferase
NP_001040666.1
  • Confirmed by transcript evidence
NP_001040667.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    10917050..10919139
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001047201.3 → NP_001040666.1  Carbohydrate sulfotransferase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040666.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L059
    Conserved Domains (1) summary
    pfam03567
    Location:63 → 296
    Sulfotransfer_2; Sulfotransferase family

  2. NM_001047202.1 → NP_001040667.1  Carbohydrate sulfotransferase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040667.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q1XFY7
    Conserved Domains (1) summary
    pfam03567
    Location:1 → 220
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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