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scl-9 SCP domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 186048, updated on 2-Nov-2024

Summary

Official Symbol
scl-9
Official Full Name
SCP domain-containing protein
Primary source
WormBase:WBGene00009890
Locus tag
CELE_F49E11.4
See related
AllianceGenome:WB:WBGene00009890
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in extracellular space. Orthologous to several human genes including GLIPR1 (GLI pathogenesis related 1); R3HDML (R3H domain containing like); and CRISPLD1 (cysteine rich secretory protein LCCL domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See scl-9 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
5
Sequence:
Chromosome: IV; NC_003282.8 (13047148..13048266)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Putative ammonium transporter 2 Neighboring gene tRNA Neighboring gene tRNA Neighboring gene SCP domain-containing protein Neighboring gene ncRNA

General protein information

Preferred Names
SCP domain-containing protein
NP_502497.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    13047148..13048266
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070096.3NP_502497.1  SCP domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502497.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q93747
    Conserved Domains (1) summary
    smart00198
    Location:23174
    SCP; SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains