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F57C7.4 PKD/REJ-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 186444, updated on 2-Nov-2024

Summary

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Official Symbol
F57C7.4
Official Full Name
PKD/REJ-like domain-containing protein
Primary source
WormBase:WBGene00010200
Locus tag
CELE_F57C7.4
See related
AllianceGenome:WB:WBGene00010200
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F57C7.4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
30
Sequence:
Chromosome: X; NC_003284.9 (10580996..10589565, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene DM13 domain-containing protein Neighboring gene Bromo domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Sodium/hydrogen exchanger Neighboring gene ncRNA Neighboring gene Syndecan;putative syndecan Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
PKD/REJ-like domain-containing protein
NP_509774.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    10580996..10589565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077373.5 → NP_509774.3  PKD/REJ-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_509774.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20945
    Conserved Domains (1) summary
    pfam02010
    Location:540 → 881
    REJ; REJ domain
Nucleotide Protein
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