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ver-4 Tyrosine-protein kinase receptor ver-4 [ Caenorhabditis elegans ]

Gene ID: 186632, updated on 2-Nov-2024

Summary

Official Symbol
ver-4
Official Full Name
Tyrosine-protein kinase receptor ver-4
Primary source
WormBase:WBGene00006897
Locus tag
CELE_F59F3.5
See related
AllianceGenome:WB:WBGene00006897
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable transmembrane receptor protein tyrosine kinase activity. Involved in nematode male tail tip morphogenesis. Predicted to be part of receptor complex. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); gastrointestinal system cancer (multiple); leukemia (multiple); lung disease (multiple); and retinal disease (multiple). Orthologous to several human genes including FLT1 (fms related receptor tyrosine kinase 1); FLT4 (fms related receptor tyrosine kinase 4); and KDR (kinase insert domain receptor). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See ver-4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
14
Sequence:
Chromosome: X; NC_003284.9 (10982381..10988267)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Peroxidasin homolog pxn-2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Tyrosine-protein kinase receptor ver-3

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables transmembrane receptor protein tyrosine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables transmembrane receptor protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in multicellular organism development IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in nematode male tail tip morphogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
part_of receptor complex IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
Tyrosine-protein kinase receptor ver-4
NP_509835.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    10982381..10988267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077434.4NP_509835.2  Tyrosine-protein kinase receptor ver-4 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_509835.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q21041
    Conserved Domains (5) summary
    smart00408
    Location:714772
    IGc2; Immunoglobulin C-2 Type
    smart00221
    Location:8701175
    STYKc; Protein kinase; unclassified specificity
    smart00410
    Location:611692
    IG_like; Immunoglobulin like
    cd00192
    Location:8741176
    PTKc; Catalytic domain of Protein Tyrosine Kinases
    pfam00047
    Location:609679
    ig; Immunoglobulin domain