H32C10.1 Cat eye syndrome critical region protein 5;Host attachment protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: H32C10.1
Official Full Name: Cat eye syndrome critical region protein 5;Host attachment protein
Primary source: WormBase:WBGene00019255
Locus tag: CELE_H32C10.1
See related: AllianceGenome:WB:WBGene00019255
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to be involved in glycerophospholipid biosynthetic process. Predicted to be active in mitochondrion. Orthologous to human HDHD5 (haloacid dehalogenase like hydrolase domain containing 5). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See H32C10.1 in Genome Data Viewer

Location:: chromosome: IV

Exon count:: 8

Sequence:: Chromosome: IV; NC_003282.8 (5934346..5937509)

Chromosome IV - NC_003282.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

H32C10.1 (e-PCR)
- UniSTS:320319

K02B2.2 (e-PCR)
- UniSTS:318296

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Process	Evidence Code	Pubs
involved_in glycerophospholipid biosynthetic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Cat eye syndrome critical region protein 5;Host attachment protein

NP_001255276.1

Confirmed by transcript evidence

NP_001255277.1

Confirmed by transcript evidence

NP_001368395.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003282.8 Reference assembly

Range

5934346..5937509

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001268348.4 → NP_001255277.1 Cat eye syndrome critical region protein 5 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_001255277.1

Status: REVIEWED

UniProtKB/TrEMBL

I2HA96

Conserved Domains (3) summary

TIGR01456
Location:21 → 351

CECR5; HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

pfam13242
Location:261 → 306

Hydrolase_like; HAD-hyrolase-like

pfam13344
Location:23 → 126

Hydrolase_6; Haloacid dehalogenase-like hydrolase
NM_001268347.3 → NP_001255276.1 Cat eye syndrome critical region protein 5 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_001255276.1

Status: REVIEWED

UniProtKB/TrEMBL

Q9TYQ4

Conserved Domains (3) summary

TIGR01456
Location:21 → 356

CECR5; HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

pfam13242
Location:266 → 311

Hydrolase_like; HAD-hyrolase-like

pfam13344
Location:23 → 131

Hydrolase_6; Haloacid dehalogenase-like hydrolase
NM_001380248.1 → NP_001368395.1 Host attachment protein [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

V6CLN3

Conserved Domains (1) summary

cl21460
Location:2 → 73

HAD_like; Haloacid Dehalogenase-like Hydrolases