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K05C4.9 Protein zyg-11 homolog B [ Caenorhabditis elegans ]

Gene ID: 187021, updated on 2-Nov-2024

Summary

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Official Symbol
K05C4.9
Official Full Name
Protein zyg-11 homolog B
Primary source
WormBase:WBGene00010585
Locus tag
CELE_K05C4.9
See related
AllianceGenome:WB:WBGene00010585
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be part of Cul2-RING ubiquitin ligase complex. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See K05C4.9 in Genome Data Viewer
Location:
chromosome: I
Exon count:
8
Sequence:
Chromosome: I; NC_003279.8 (14726281..14730738, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene CUB domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Leucine Rich repeat-containing domain protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
part_of Cul2-RING ubiquitin ligase complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Protein zyg-11 homolog B
NP_001362175.1
  • Confirmed by transcript evidence
NP_001362176.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    14726281..14730738 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001375244.2 → NP_001362175.1  Protein zyg-11 homolog B [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5K1I8Q0
    Conserved Domains (2) summary
    sd00031
    Location:177 → 198
    LRR_1; leucine-rich repeat [structural motif]
    sd00034
    Location:126 → 151
    LRR_AMN1; leucine-rich repeat [structural motif]

  2. NM_001375243.3 → NP_001362176.1  Protein zyg-11 homolog B [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5K1IAT8
    Conserved Domains (2) summary
    COG4886
    Location:61 → 313
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00034
    Location:86 → 111
    LRR_AMN1; leucine-rich repeat [structural motif]
Nucleotide Protein
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