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K08B12.3 Haloacid dehalogenase-like hydrolase domain-containing protein 2 [ Caenorhabditis elegans ]

Gene ID: 187136, updated on 2-Nov-2024

Summary

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Official Symbol
K08B12.3
Official Full Name
Haloacid dehalogenase-like hydrolase domain-containing protein 2
Primary source
WormBase:WBGene00019522
Locus tag
CELE_K08B12.3
See related
AllianceGenome:WB:WBGene00019522
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable phosphatase activity. Predicted to be involved in dephosphorylation. Predicted to be active in cytoplasm. Orthologous to human HDHD2 (haloacid dehalogenase like hydrolase domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See K08B12.3 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (6235176..6237734)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Haloacid dehalogenase-like hydrolase domain-containing protein 2
NP_504597.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    6235176..6237734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072196.3 → NP_504597.1  Haloacid dehalogenase-like hydrolase domain-containing protein 2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504597.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O01581
    Conserved Domains (3) summary
    TIGR01458
    Location:4 → 252
    HAD-SF-IIA-hyp3; HAD-superfamily subfamily IIA hydrolase, TIGR01458
    pfam13242
    Location:173 → 245
    Hydrolase_like; HAD-hyrolase-like
    pfam13344
    Location:7 → 100
    Hydrolase_6; Haloacid dehalogenase-like hydrolase
Nucleotide Protein
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