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nsph-1.1 Nematode Specific Peptide family [ Caenorhabditis elegans ]

Gene ID: 187165, updated on 18-Sep-2024

Summary

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Official Symbol
nsph-1.1
Official Full Name
Nematode Specific Peptide family
Primary source
WormBase:WBGene00010682
Locus tag
CELE_K08F8.5
See related
AllianceGenome:WB:WBGene00010682
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See nsph-1.1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
9
Sequence:
Chromosome: II; NC_003280.10 (8766775..8769422)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Alpha-(1,3)-fucosyltransferase fut-1 Neighboring gene Phenylalanine-4-hydroxylase Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Mediator of RNA polymerase II transcription subunit 13 Neighboring gene Sarcoglycan complex subunit protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. NHR-23 and SPE-44 regulate distinct sets of genes during Caenorhabditis elegans spermatogenesis. Ragle JM, et al. G3 (Bethesda), 2022 Nov 4. PMID 36135804, Free PMC Article
  2. Transcriptomics of ivermectin response in Caenorhabditis elegans: Integrating abamectin quantitative trait loci and comparison to the Ivermectin-exposed DA1316 strain. Dube F, et al. PLoS One, 2023. PMID 37141255, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
Nematode Specific Peptide family
NP_001348639.1
  • Partially confirmed by transcript evidence;
    Product from WormBase gene class nsph
NP_495864.2
  • Confirmed by transcript evidence;
    Product from WormBase gene class nsph

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    8766775..8769422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063463.5 → NP_495864.2  Nematode Specific Peptide family [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495864.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    P90926
    Conserved Domains (1) summary
    pfam12150
    Location:14 → 357
    MFP2b; Cytosolic motility protein

  2. NM_001361866.2 → NP_001348639.1  Nematode Specific Peptide family [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21365
    Conserved Domains (1) summary
    pfam12150
    Location:14 → 379
    MFP2b; Cytosolic motility protein
Nucleotide Protein
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