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srt-54 G_PROTEIN_RECEP_F1_2 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 187250, updated on 2-Nov-2024

Summary

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Official Symbol
srt-54
Official Full Name
G_PROTEIN_RECEP_F1_2 domain-containing protein
Primary source
WormBase:WBGene00019614
Locus tag
CELE_K10B4.2
See related
AllianceGenome:WB:WBGene00019614
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srt-54 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (117216..118691)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Cationic amino acid transporter C-terminal domain-containing protein Neighboring gene Ntox44 domain-containing protein;Peptidase S1 domain-containing protein Neighboring gene Protein melted homolog Neighboring gene Neuromedin U receptor homolog nmur-2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
G_PROTEIN_RECEP_F1_2 domain-containing protein
NP_493665.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    117216..118691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_061264.1 → NP_493665.1  G_PROTEIN_RECEP_F1_2 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493665.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17238
    Conserved Domains (1) summary
    pfam10321
    Location:10 → 317
    7TM_GPCR_Srt; Serpentine type 7TM GPCR chemoreceptor Srt
Nucleotide Protein
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