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taap-1 TAil-Anchored Protein [ Caenorhabditis elegans ]

Gene ID: 187453, updated on 2-Nov-2024

Summary

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Official Symbol
taap-1
Official Full Name
TAil-Anchored Protein
Primary source
WormBase:WBGene00010879
Locus tag
CELE_M05D6.6
See related
AllianceGenome:WB:WBGene00010879
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Orthologous to human FAM162A (family with sequence similarity 162 member A) and FAM162B (family with sequence similarity 162 member B). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See taap-1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (8482376..8483269, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Tyrosine-protein phosphatase domain-containing protein Neighboring gene Beta-lactamase-related domain-containing protein Neighboring gene HIG1 domain-containing protein Neighboring gene Trimethyllysine dioxygenase, mitochondrial Neighboring gene Receptor-type tyrosine-protein phosphatase kappa;Receptor-type tyrosine-protein phosphatase mu;Tyrosine-protein phosphatase domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Individual cell types in C. elegans age differently and activate distinct cell-protective responses. Roux AE, et al. Cell Rep, 2023 Aug 29. PMID 37531250
  2. CCAR-1 works together with the U2AF large subunit UAF-1 to regulate alternative splicing. Lugano DI, et al. RNA Biol, 2024 Jan. PMID 38126797, Free PMC Article
  3. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
  4. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
TAil-Anchored Protein
NP_495792.1
  • Confirmed by transcript evidence;
    Product from WormBase gene class taap

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    8482376..8483269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063391.7 → NP_495792.1  TAil-Anchored Protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495792.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21525
Nucleotide Protein
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