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M110.3 E3 ubiquitin-protein ligase MARCHF5 [ Caenorhabditis elegans ]

Gene ID: 187472, updated on 2-Nov-2024

Summary

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Official Symbol
M110.3
Official Full Name
E3 ubiquitin-protein ligase MARCHF5
Primary source
WormBase:WBGene00010913
Locus tag
CELE_M110.3
See related
AllianceGenome:WB:WBGene00010913
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable zinc ion binding activity. Predicted to be located in membrane. Orthologous to human MARCHF5 (membrane associated ring-CH-type finger 5). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See M110.3 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (8214575..8216616, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Small integral membrane protein 15 Neighboring gene ncRNA Neighboring gene MIF4G domain-containing protein Neighboring gene PID domain-containing protein Neighboring gene DUF148 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MARCHF5
NP_495728.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    8214575..8216616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063327.5 → NP_495728.1  E3 ubiquitin-protein ligase MARCHF5 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495728.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21530
    Conserved Domains (1) summary
    cd16495
    Location:16 → 67
    RING_CH-C4HC3_MARCH; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING-CH proteins (MARCH)
Nucleotide Protein
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