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R02D5.6 G-protein coupled receptors family 1 profile domain-containing protein;Serpentine receptor class gamma [ Caenorhabditis elegans ]

Gene ID: 187523, updated on 2-Nov-2024

Summary

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Official Symbol
R02D5.6
Official Full Name
G-protein coupled receptors family 1 profile domain-containing protein;Serpentine receptor class gamma
Primary source
WormBase:WBGene00010979
Locus tag
CELE_R02D5.6
See related
AllianceGenome:WB:WBGene00010979
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See R02D5.6 in Genome Data Viewer
Location:
chromosome: V
Exon count:
10
Sequence:
Chromosome: V; NC_003283.11 (14511634..14518110, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene GATA-type domain-containing protein Neighboring gene Transmembrane protein Neighboring gene ATP synthase subunit s, mitochondrial Neighboring gene tRNA (guanine(37)-N1)-methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
G-protein coupled receptors family 1 profile domain-containing protein;Serpentine receptor class gamma
NP_001256589.1
  • Confirmed by transcript evidence
NP_001256590.1
  • Confirmed by transcript evidence
NP_001256591.1
  • Confirmed by transcript evidence
NP_001263886.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    14511634..14518110 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001276957.3 → NP_001263886.1  Serpentine receptor class gamma [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263886.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    K8ESD2
    Conserved Domains (1) summary
    cd14964
    Location:14 → 217
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  2. NM_001269660.1 → NP_001256589.1  G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256589.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21638
    Conserved Domains (2) summary
    cd14964
    Location:26 → 49
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:26 → 212
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  3. NM_001269661.1 → NP_001256590.1  G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256590.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D5MCS8
    Conserved Domains (2) summary
    cd14964
    Location:32 → 55
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:32 → 218
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  4. NM_001269662.1 → NP_001256591.1  G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256591.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D5MCS9
    Conserved Domains (2) summary
    cd14964
    Location:136 → 156
    7tm_GPCRs; TM helix 4 [structural motif]
    cl28897
    Location:74 → 202
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
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