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R02F2.8 Amino acid transporter transmembrane domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 187530, updated on 2-Nov-2024

Summary

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Official Symbol
R02F2.8
Official Full Name
Amino acid transporter transmembrane domain-containing protein
Primary source
WormBase:WBGene00019837
Locus tag
CELE_R02F2.8
See related
AllianceGenome:WB:WBGene00019837
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See R02F2.8 in Genome Data Viewer
Location:
chromosome: III
Exon count:
8
Sequence:
Chromosome: III; NC_003281.10 (5492925..5495268, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene Myb-binding protein 1A-like protein Neighboring gene Chitin-binding type-2 domain-containing protein Neighboring gene Rho guanine nucleotide exchange factor osg-1 Neighboring gene Large ribosomal subunit protein mL62 Neighboring gene Cyclin-like domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A global analysis of genetic interactions in Caenorhabditis elegans. Byrne AB, et al. J Biol, 2007. PMID 17897480, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Amino acid transporter transmembrane domain-containing protein
NP_498173.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    5492925..5495268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_065772.6 → NP_498173.1  Amino acid transporter transmembrane domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498173.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21652
    Conserved Domains (1) summary
    pfam01490
    Location:22 → 416
    Aa_trans; Transmembrane amino acid transporter protein
Nucleotide Protein
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