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srd-39 Serpentine Receptor, class D (delta) [ Caenorhabditis elegans ]

Gene ID: 187576, updated on 2-Nov-2024

Summary

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Official Symbol
srd-39
Official Full Name
Serpentine Receptor, class D (delta)
Primary source
WormBase:WBGene00005117
Locus tag
CELE_R04D3.8
See related
AllianceGenome:WB:WBGene00005117
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in hypodermis and intestine. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srd-39 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Sequence:
Chromosome: X; NC_003284.9 (13298863..13300603, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class D (Delta) Neighboring gene pseudo Neighboring gene Serpentine Receptor, class D (Delta) Neighboring gene Serpentine Receptor, class D (Delta)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The CHARGE syndrome ortholog CHD-7 regulates TGF-β pathways in Caenorhabditis elegans. Jofré DM, et al. Proc Natl Acad Sci U S A, 2022 Apr 12. PMID 35394881, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class D (delta)
NP_001309447.1
  • Product from WormBase gene class srd;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    13298863..13300603 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001322641.3 → NP_001309447.1  Serpentine Receptor, class D (delta) [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21716
    Conserved Domains (1) summary
    pfam10317
    Location:11 → 300
    7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
Nucleotide Protein
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