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R07B7.10 SLC (SoLute Carrier) homolog [ Caenorhabditis elegans ]

Gene ID: 187658, updated on 2-Nov-2024

Summary

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Official Symbol
R07B7.10
Official Full Name
SLC (SoLute Carrier) homolog
Primary source
WormBase:WBGene00011094
Locus tag
CELE_R07B7.10
See related
AllianceGenome:WB:WBGene00011094
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable high-affinity L-arginine transmembrane transporter activity and high-affinity lysine transmembrane transporter activity. Predicted to be involved in mitochondrial L-ornithine transmembrane transport. Predicted to be located in membrane. Predicted to be active in mitochondrion. Orthologous to human SLC25A45 (solute carrier family 25 member 45); SLC25A47 (solute carrier family 25 member 47); and SLC25A48 (solute carrier family 25 member 48). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See R07B7.10 in Genome Data Viewer
Location:
chromosome: V
Exon count:
7
Sequence:
Chromosome: V; NC_003283.11 (12083216..12086460)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nucleotid_trans domain-containing protein Neighboring gene ncRNA Neighboring gene Lipase_GDSL domain-containing protein Neighboring gene Lipase_GDSL domain-containing protein Neighboring gene Alpha-galactosidase Neighboring gene ncRNA Neighboring gene Glycosyltransferase family 92 protein R07B7.12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables high-affinity lysine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in L-arginine transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in mitochondrial L-ornithine transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
SLC (SoLute Carrier) homolog
NP_506030.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12083216..12086460
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073629.4 → NP_506030.2  SLC (SoLute Carrier) homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506030.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21800
    Conserved Domains (1) summary
    pfam00153
    Location:199 → 284
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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