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nhr-207 Nuclear receptor [ Caenorhabditis elegans ]

Gene ID: 187661, updated on 2-Nov-2024

Summary

Official Symbol
nhr-207
Official Full Name
Nuclear receptor
Primary source
WormBase:WBGene00011098
Locus tag
CELE_R07B7.14
See related
AllianceGenome:WB:WBGene00011098
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Involved in response to starvation. Predicted to be located in nucleus. Is expressed in several structures, including anal sphincter muscle; gonad; pharyngeal neurons; pharyngeal-intestinal valve; and rectal valve cell. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See nhr-207 in Genome Data Viewer
Location:
chromosome: V
Exon count:
7
Sequence:
Chromosome: V; NC_003283.11 (12096146..12097931)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nuclear receptor Neighboring gene Nuclear Hormone Receptor family Neighboring gene Nuclear hormone receptor family member nhr-209 Neighboring gene ncRNA Neighboring gene Nuclear hormone receptor family member nhr-154

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables nuclear receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intracellular receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in response to starvation IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Nuclear receptor
NP_506035.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12096146..12097931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073634.3NP_506035.1  Nuclear receptor [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506035.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21804
    Conserved Domains (2) summary
    smart00399
    Location:36107
    ZnF_C4; c4 zinc finger in nuclear hormone receptors
    smart00430
    Location:212374
    HOLI; Ligand binding domain of hormone receptors