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R08D7.5 putative calcium-binding protein R08D7.5 [ Caenorhabditis elegans ]

Gene ID: 187699, updated on 2-Nov-2024

Summary

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Official Symbol
R08D7.5
Official Full Name
putative calcium-binding protein R08D7.5
Primary source
WormBase:WBGene00011145
Locus tag
CELE_R08D7.5
See related
AllianceGenome:WB:WBGene00011145
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable calcium ion binding activity. Predicted to be involved in centriole replication. Predicted to be active in centriole; centrosome; and nucleus. Is expressed in neurons. Orthologous to human CETN2 (centrin 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See R08D7.5 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Sequence:
Chromosome: III; NC_003281.10 (8974126..8975061)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Putative RNA polymerase II subunit B1 CTD phosphatase rpap-2 Neighboring gene Eukaryotic translation initiation factor 3 subunit D Neighboring gene Complex 1 LYR protein domain-containing protein;Complex1_LYR_dom domain-containing protein Neighboring gene putative 3',5'-cyclic phosphodiesterase pde-2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables calcium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in centriole replication IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in microtubule cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in centriole IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in centrosome IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
putative calcium-binding protein R08D7.5
NP_498986.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    8974126..8975061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066585.4 → NP_498986.3  putative calcium-binding protein R08D7.5 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P30644
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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