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sru-48 Serpentine Receptor, class T [ Caenorhabditis elegans ]

Gene ID: 188031, updated on 2-Nov-2024

Summary

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Official Symbol
sru-48
Official Full Name
Serpentine Receptor, class T
Primary source
WormBase:WBGene00005711
Locus tag
CELE_T03G11.2
See related
AllianceGenome:WB:WBGene00005711
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Is expressed in PVT; amphid neurons; and intestine. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See sru-48 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Sequence:
Chromosome: X; NC_003284.9 (5180174..5181495)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Zinc finger C2HC domain-containing protein T03G11.3 Neighboring gene DREV methyltransferase Neighboring gene ncRNA Neighboring gene MARVEL domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class T
NP_508881.2
  • Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    5180174..5181495
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_076480.2 → NP_508881.2  Serpentine Receptor, class T [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_508881.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22124
    Conserved Domains (1) summary
    pfam10322
    Location:11 → 311
    7TM_GPCR_Sru; Serpentine type 7TM GPCR chemoreceptor Sru
Nucleotide Protein
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