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T04A11.4 Phenazine biosynthesis-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 188044, updated on 2-Nov-2024

Summary

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Official Symbol
T04A11.4
Official Full Name
Phenazine biosynthesis-like domain-containing protein
Primary source
WormBase:WBGene00011419
Locus tag
CELE_T04A11.4
See related
AllianceGenome:WB:WBGene00011419
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable catalytic activity. Predicted to be involved in biosynthetic process. Orthologous to human PBLD (phenazine biosynthesis like protein domain containing). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T04A11.4 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
4
Sequence:
Chromosome: IV; NC_003282.8 (12482847..12484579, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Phenazine biosynthesis-like domain-containing protein Neighboring gene Ig-like and fibronectin type-III domain-containing protein 1 Neighboring gene Phenazine biosynthesis-like domain-containing protein Neighboring gene Serpentine Receptor, class U;Serpentine receptor class U-26

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Phenazine biosynthesis-like domain-containing protein
NP_001370043.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    12482847..12484579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383220.2 → NP_001370043.1  Phenazine biosynthesis-like domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EG50
    Conserved Domains (1) summary
    cl29427
    Location:10 → 311
    PhzC-PhzF; Phenazine biosynthesis-like protein
Nucleotide Protein
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