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srh-75 Serpentine Receptor, class H [ Caenorhabditis elegans ]

Gene ID: 188057, updated on 2-Nov-2024

Summary

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Official Symbol
srh-75
Official Full Name
Serpentine Receptor, class H
Primary source
WormBase:WBGene00005296
Locus tag
CELE_T04C12.2
See related
AllianceGenome:WB:WBGene00005296
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See srh-75 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (11055294..11057143, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Conserved plasma membrane protein Neighboring gene LITAF domain-containing protein Neighboring gene LITAF domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses. Robertson HM. Genome Res, 2000 Feb. PMID 10673277
  2. Chromatin and RNAi factors protect the C. elegans germline against repetitive sequences. Robert VJ, et al. Genes Dev, 2005 Apr 1. PMID 15774721, Free PMC Article
  3. Regulation of signaling genes by TGFbeta during entry into dauer diapause in C. elegans. Liu T, et al. BMC Dev Biol, 2004 Sep 20. PMID 15380030, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class H
NP_001024099.2
  • Partially confirmed by transcript evidence
NP_001024100.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    11055294..11057143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001028928.3 → NP_001024099.2  Serpentine Receptor, class H [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024099.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O02296
    Conserved Domains (1) summary
    pfam10318
    Location:25 → 328
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

  2. NM_001028929.4 → NP_001024100.2  Serpentine Receptor, class H [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024100.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JKP7
    Conserved Domains (1) summary
    pfam10318
    Location:35 → 292
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
Nucleotide Protein
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